List of species and infraspecific taxa
- Species: Candelariella kuusamoënsis Räsänen
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Candelariella reflexa (Nyl.) Lettau
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Candelariella superdistans (Nyl.) Malme
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Candelariella vitellina (Hoffm.) Müll. Arg.
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Candelariella xanthostigma (Ach.) Lettau
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- tera-sädesamblik
- Species: Capronia peltigerae (Fuckel) D. Hawksw.
- Remark: see: Knufia peltigerae (Fuckel) Réblová & Unter.
- Fungus type: lichenicolous
- Treatment in Estonia: synonym
- Species: Carbonea vitellinaria (Nyl.) Hertel
- Remark:
- Fungus type: lichenicolous
- Treatment in Estonia: certain
- Species: Catapyrenium cinereum (Pers.) Körb.
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- hall rähksamblik
- Species: Catapyrenium pilosellum Breuss
- Remark: see: Placidium pilosellum
- Fungus type: lichenized
- Treatment in Estonia: synonym
- karvane rähksamblik
- Species: Catapyrenium rufescens (Ach.) Breuss
- Remark: see: Placidium rufescens
- Fungus type: lichenized
- Treatment in Estonia: synonym extinct
- pruunikas rähksamblik
- Species: Catapyrenium squamulosum (Ach.) Breuss
- Remark: see: Placidium squamulosum
- Fungus type: lichenized
- Treatment in Estonia: synonym
- soomus-rähksamblik
- Species: Catillaria aphana (Nyl.) Coppins
- Remark: includes earlier misidentification of Catillaria cryptophila Th. Fr. & Almq.
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Catillaria chalybeia (Borrer) A. Massal.
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Catillaria cryptophila Th. Fr. & Almq.
- Remark: excluded as misidentification: re-identified as Catillaria aphana
- Fungus type: lichenized
- Treatment in Estonia: misidentification
- Species: Catillaria lenticularis (Ach.) Th. Fr.
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Catillaria minuta (A. Massal.) Lettau
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Catillaria nigroclavata (Nyl.) Schuler
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Catinaria atropurpurea (Schaer.) Vězda & Poelt
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Cecidonia umbonella (Nyl.) Triebel & Rambold
- Remark:
- Fungus type: lichenicolous
- Treatment in Estonia: certain
- Species: Cercidospora epipolytropa (Mudd) Arnold
- Remark:
- Fungus type: lichenicolous
- Treatment in Estonia: certain
- Species: Cercidospora macrospora (Uloth) Hafellner & Nav.-Ros.
- Remark:
- Fungus type: lichenicolous
- Treatment in Estonia: certain
- Species: Cetraria aculeata (Schreb.) Fr.
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- sarv-käosamblik
- Species: Cetraria ericetorum Opiz
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- kitsas käosamblik
- Species: Cetraria islandica ssp. crispiformis (Räsänen) Kärnefelt
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Cetraria islandica (L.) Ach. ssp. islandica
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- islandi käosamblik