• Species: Scytinium fragile (Taylor) Otálora, P.M. Jørg. & Wedin
• Remark:
• Fungus type: lichenized
• Treatment in Estonia: certain
• habras tardsamblik

• Species: Spirographa tricupulata Flakus, Etayo & Miadlikowska
• Remark:
• Fungus type: lichenicolous
• Treatment in Estonia: certain

• Species: Stigmidium hageniae (Rehm) Hafellner
• Remark:
• Fungus type: lichenicolous
• Treatment in Estonia: certain

• Species: Toniniopsis dissimilis Gerasimova & A. Beck.
• Remark:
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Toniniopsis separabilis (Nyl.) Gerasimova & A. Beck.
• Remark:
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Xylographa rubescens Räsänen
• Remark:
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Lecidella elaeochroma f. soralifera (Erichsen) D. Hawksw.
• Remark:
• Fungus type: lichenized
• Treatment in Estonia: certain
• piir-kärnsamblik

• Species: Calogaya saxicola (Hoffm.) Vondrák
• Remark: earlier under Caloplaca saxicola
• Fungus type: lichenized
• Treatment in Estonia: certain
• müüri-kuldsamblik

• Species: Lepraria finkii (B. de Lesd.) R.C. Harris
• Remark: see: Lepraria lobificans
• Fungus type: lichenized
• Treatment in Estonia: synonym

• Species: Acarospora smaragdula (Wahlenb. ex Ach.) A. Massal.
• Remark: see: Myriospora smaragdula
• Fungus type: lichenized
• Treatment in Estonia: synonym

• Species: Lepra albescens (Huds.) Hafellner
• Remark: earlier under Pertusaria albescens
• Fungus type: lichenized
• Treatment in Estonia: certain
• ketas-lumisamblik

• Species: Lepra amara (Ach.) Hafellner
• Remark: earlier under Pertusaria amara
• Fungus type: lichenized
• Treatment in Estonia: certain
• kibe lumisamblik

• Species: Lepra borealis (Erichsen) I. Schmitt, Hodkinson & Lumbsch
• Remark: earlier under Pertusaria borealis
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Lepra corallina (L.) Hafellner
• Remark: earlier under Pertusaria corallina
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Lepra multipuncta (Turner) Hafellner
• Remark: earlier under Pertusaria multipuncta
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Lepra ophthalmiza (Nyl.) Hafellner
• Remark: earlier under Pertusaria ophthalmiza
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Varicellaria hemisphaerica (Flörke) I. Schmitt & Lumbsch
• Remark: earlier under Pertusaria hemisphaerica
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Thalloidima physaroides (Opiz) Kistenich, Timdal, Bendiksby & S. Ekman
• Remark: earlier under Toninia physaroides
• Fungus type: lichenized
• Treatment in Estonia: certain
• sammas-nappsamblik

• Species: Thalloidima sedifolium (Scop.) Kistenich, Timdal, Bendiksby & S. Ekman
• Remark: earlier under Toninia sedifolia
• Fungus type: lichenized
• Treatment in Estonia: certain
• sinakas nappsamblik

• Species: Toniniopsis verrucarioides (Nyl.) Kistenich, Timdal, Bendiksby & S. Ekman
• Remark: earlier under Toninia verrucarioides
• Fungus type: lichenized
• Treatment in Estonia: certain
• pruunikas nappsamblik

• Species: Bryostigma muscigenum (Th. Fr.) Frisch & G. Thor
• Remark: earlier under Arthonia muscigena
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Bryostigma epiphyscium (Nyl.) S.Y. Kondr. & Hur
• Remark: earlier under Arthonia epiphyscia
• Fungus type: lichenicolous
• Treatment in Estonia: certain

• Species: Circinaria hoffmanniana (S. Ekman & Fröberg ex R. Sant.) A. Nordin
• Remark: earlier under Aspicilia contorta ssp. hoffmanniana or Circinaria contorta ssp. hoffmanniana
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Biatora fallax Hepp
• Remark:
• Fungus type: lichenized
• Treatment in Estonia: certain

• Species: Buelliella minimula (Tuck.) Fink
• Remark:
• Fungus type: lichenicolous
• Treatment in Estonia: certain

• Species:
• Remark:
• Fungus type:
• Treatment in Estonia: