List of species and infraspecific taxa
- Species: Bacidina assulata (Körb.) Vězda
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Bacidina brandii (Coppins & van den Boom) M. Hauck & V. Wirth
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Candelariella lutella (Vain.) Räsänen
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Gyalidea fritzei (Stein) Vězda
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Piccolia ochrophora (Nyl.) Hafellner
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Protoparmelia oleagina (Harm.) Coppins
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Sclerophora amabilis (Tibell) Tibell
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Strangospora deplanata (Almq.) Clauzade & Cl. Roux
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Cetrelia monachorum (Zahlbr.) W.L. Culb. & C.F. Culb.
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- munga-helksamblik
- Species: Peltigera castanea Goward, Goffinet & Miadlikowska
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- kastanpruun kilpsamblik
- Species: Peltigera islandica Goward & Manoharan-Basil
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- islandi kilpsamblik
- Species: Peltigera occidentalis (E. Dahl) Kristinsson
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- põhja-kilpsamblik
- Species: Alyxoria culmigena (Lib.) Ertz
- Remark: earlier under Opegrapha herbarum Mont. & Opegrapha culmigena Lib.
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Xanthoria oregana Gyeln.
- Remark: see: Xanthomendoza oregana
- Fungus type: lichenized
- Treatment in Estonia: synonym
- oregoni korpsamblik
- Species: Flavoplaca coronata (Kremp. ex Körb.) Arup, Frödén & Søchting
- Remark: earler under Caloplaca coronata
- Fungus type: lichenized
- Treatment in Estonia: certain
- kare kuldsamblik
- Species: Caloplaca lithophila H. Magn.
- Remark: see: Athallia holocarpa or A. vitellinula
- Fungus type: lichenized
- Treatment in Estonia: synonym
- Species: Rufoplaca arenaria Arup, Søchting & Frödén
- Remark: earlier under Caloplaca erythrocarpa; see: Kuettlingeria erythrocarpa
- Fungus type: lichenized
- Treatment in Estonia: misidentification extinct
- Species: Rinodina subparieta (Nyl.) Zahlbr.
- Remark: see: Rinodina subpariata; earlier under Rinodina degeliana
- Fungus type: lichenized
- Treatment in Estonia: synonym
- Species: Sphaerellothecium cladoniae (Alstrup & Zhurb.) Hafellner
- Remark: earlier under Sphaerellothecium araneosum var. cladoniae
- Fungus type: lichenicolous
- Treatment in Estonia: certain
- Species: Lichenodiplis lichenicola Dyko & D. Hawksw.
- Remark:
- Fungus type: lichenicolous
- Treatment in Estonia: certain
- Species: Acarospora fusca B. de Lesd.
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Botryolepraria lesdainii (Hue) Canals, Hern.-Mar., Gómez-Bolea & Llimona
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- Species: Bryostigma parietinarium (Hafellner & Fleischhacker) S.Y. Kondr. & Hur
- Remark: includes earlier misidentification of Arthonia molendoi
- Fungus type: lichenicolous
- Treatment in Estonia: certain
- Species: Calogaya pusilla (A. Massal.) Arup, Frödén & Søchting
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain
- kirme-kuldsamblik
- Species: Candelariella efflorescens R.C. Harris & W.R. Buck
- Remark:
- Fungus type: lichenized
- Treatment in Estonia: certain